Cupin family protein

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August undefined, 2024

WebJun 30, 2015 · The major seed storage proteins (SSPs) in rice seeds have been classified into three types, glutelins, prolamins, and globulin, and the proportion of each SSP varies. It has been shown in rice mutants that when either glutelins or prolamins are defective, the expression of another type of SSP is promoted to counterbalance the deficit. However, … WebReplication Factor C. RFC, the eukaryotic clamp loader, is a five-subunit complex of 140-, 40-, 38-, 37-, and 36-kDa proteins (for Rfc1–5, respectively). All five subunits are essential for cell viability and all belong to the AAA+ family of ATPases. In addition to the conserved domains found in all members of this family, the large subunit ...

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WebJul 28, 2016 · This report constitutes the first identification of an LPS-interacting protein, both in the cupin family and in H. pylori. Furthermore, identification of the ability of HP0902 to bind LPS uncovers a putative role for this protein in H. pylori pathogenicity. References WebProtein Family Annotation Pfam Database Homepage. Chains Accession Identifier Description Comments Source; A, B: PF13621: Cupin-like domain (Cupin_8) Cupin-like domain: This cupin like domain shares similarity to the JmjC domain. Domain : Gene Product Annotation Gene Product Annotation. Chains Polymer Molecular Function … chipped blade コアキーパー

RCSB PDB - 2B8M: Crystal structure of a rmlc-like cupin family protein ...

WebDec 20, 2016 · Cupin is a superfamily of functionally diverse proteins, which include seed storage proteins and modification-related proteins of cell wall carbohydrates (Dunwell et al. 2004). Similar to Gt3, cupin family protein (L10) was also uniquely accumulated in R8097 but totally suppressed by AR treatment. WebThe protein family of PRMT and SET were responsible for histone methylation of arginine and lysine residues, respectively (Ahmad and Cao 2012; Zhang and Ma 2012 ... including JmjN and JmjC. In the JHDM2 subfamily, each member contained a Ring domain and Cupin_RmIC-like domain, which was responsible for the demethylation activity of this ... WebSep 29, 2024 · pfam07883 (PSSM ID: 429713): Conserved Protein Domain Family Cupin_2, This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel) 6L2F,1O4T,2GU9,2OA2. Conserved Protein Domain Family. Cupin_2. Entrez: CDD: Structure: Protein: chipped blade core

Frontiers Genome-wide identification and functional analysis of cupin …

WebOBJECTIVE: We develop a new diabetes CHD risk estimator using traditional risk factors plus coronary artery calcium (CAC), ankle-brachial index (ABI), high sensitivity C-reactive protein, family history of CHD, and carotid intima-media thickness and compared it with United Kingdom Prospective Diabetes study (UKPDS), Framingham risk and the … Web3,996 Likes, 107 Comments - Dian Meutia Lestari Nitami (@bu_deedee) on Instagram: "Beef Up for Family. Berikan yang terbaik untuk keluarga anda di bulan istimewa ini ... chipped black porcelain bowlWebJun 10, 2015 · We identified and characterized a cupin domain-containing protein (VdQase) with a dioxygenase activity and a potential role in V. dahliae-potato … granular coated metal roofing

"WebOct 19, 2024 · In this study, we examined the genetic regulation of seedling percentage at the early germination using a genome-wide association study in rice. One major quantitative trait loci qSP3 for seedling percentage was identified, and the candidate gene was validated as qSP3, encoding a cupin domain protein OsCDP3.10 for the synthesis of 52 kDa … " - Cupin family protein

Cupin family protein

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WebSep 6, 2013 · The cupin superfamily is extremely diverse and includes catalytically inactive seed storage proteins, sugar-binding metal-independent epimerases, and metal-dependent enzymes possessing dioxygenase, decarboxylase, and other activities. WebInterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites. We combine protein signatures from a number of member databases into a single searchable resource, capitalising on their individual strengths to produce a powerful integrated database and diagnostic tool.

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WebDec 6, 2024 · SsYCP1 is a YML079-like cupin protein that is highly expressed and secreted during S. sclerotiorum infection. Ectopic overexpression of SsYCP1 promotes S. sclerotiorum infection, while silencing has the opposite effect, suggesting that SsYCP1 is a potential effector protein that contributes to S. sclerotiorum pathogenicity.

WebApr 9, 2024 · YciI family protein 7: B1812_RS12265: B1812_RS12265: 2610712: 2613204: TonB-dependent siderophore receptor 8: B1812_RS00815: B1812_RS00815: 173735: 175063: hypothetical protein 9: ... cupin domain-containing protein 23: B1812_RS11255: B1812_RS11255: 2416005: 2416529: DEAD/DEAH box helicase 24: lepA: … WebIn this study, the cupin_1 domain protein (CDP) gene family in B. napus was genome widely characterized and systematically investigated. In total, 96 BnCDP genes were identified and clustered into six distinct subfamilies (I–VI) based on their evolutionary relationships. Genes from the same subfamily have similar gene structure and motif ...

WebOct 7, 2005 · Crystal structure of a rmlc-like cupin family protein with a double-stranded beta-helix fold (mj0764) from methanocaldococcus jannaschii at 1.70 A resolution PDB DOI: 10.2210/pdb2B8M/pdb Classification: UNKNOWN FUNCTION Organism (s): Methanocaldococcus jannaschii Expression System: Escherichia coli Mutation (s): Yes WebDec 1, 2002 · The cupin family comprises a family of proteins possessing a common beta-barrel structure that is thought to have originated in a prokaryotic ancestor.

WebHypoxia-inducible Factor (HIF) Asparagine Hydroxylase Is Identical to Factor Inhibiting HIF (FIH) and Is Related to the Cupin Structural Family* Christopher J Schofield, Neil J Oldham, S. Bhattacharya, 2002, The Journal of Biological Chemistry.

WebFeb 21, 2024 · DddU is a cupin superfamily DMSP lyase like DddL, DddQ, DddW, DddK and DddY, but shares <15% amino acid sequence identity with these enzymes. Moreover, DddU proteins forms a distinct clade from these other cupin-containing DMSP lyases. ... IEX10_RS05395 was annotated as a DMSP lyase family protein, however, the amino … granular corneal stromal dystrophyWebFunctional characterization of the pathogenesis-related protein family 10 gene, PgPR10-4, from Panax ginseng in response to environmental stresses [J]. Kim Yu-Jin, Jang Moon-Gi, Lee Hye-Jin, Plant Cell, Tissue and Organ Culture: An International Journal on in Vitro Culture of Higher Plants . 2014 ,第3期 granular compost topdressingWebOct 21, 2024 · Summary. Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly … granular corneal dystrophy symptomsWebDec 10, 2024 · It has been noticed that a collection of three genes, encoding a lysine/ornithine N -hydroxylase, a cupin protein, and a methionyl-tRNA synthase (MetRS) homolog are widely distributed in... granular computing hotosWebJun 1, 2024 · Abstract Pirins are nuclear bicupin proteins, encoded by genes that are one of several gene families that comprise the cupin superfamily in plants. Pirin genes have … granular compost and seedWebThe crystal structure of a PF10014 member from Methylibium petroleiphilum at 1.9 Å resolution shows strong structural similarity to cupin dioxygenases in overall fold and active site, despite very remote homology. granular class bWebThe cupin superfamily of proteins, named on the basis of a conserved beta-barrel fold ('cupa' is the Latin term for a small barrel), was originally discovered using a … granular crossword clue